Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATSIYMINLAVFDLLLVLSLPFKMVLSQVQSPF---PSLCTLVECLYFVSMYGSVFTICFISMDRFLAIRYPLLVSHLRSPRKIFGICCT--IWVLVWTGSIPIYSFHG----KVEKYMCFHNMSDDTWSAKVFFPL--EVFGFLLPMGIMGFCCSRSIHILLGR------------------------------RDHTQDWV-----------------QQKACIYSIAASLAVFVVSFLPVHLGFFLQFLVRNSFIVE--CRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIRAHRPSRVQLVLQDTTISRG |
| 4XNW Chain:A ((55-382)) | ------------------------AVYILVFIIGFLGNSVAIWMFVFHMK----PWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPL--KSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259823 for 1979 contacts (-131.3/contact) +
2D Compatibility (PS) -26843 + (NN) -3740 + (LL) 3412
1D Compatibility (HY) -28800 + (ID) 3750
Total energy: -319544.0 ( -161.47 by residue)
QMean score : 0.129
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