Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSANQTASVTEFILLGLSAHPKLEKTFFVLILLMYLVILLG---NGVLILMTVSNSHLHMPMYFFLGNLSFLDICYTTSSVPLILDSFLTPRKTISFSACAVQMFLSFAMGATECVLLSMMAFDRYVAICNPLRYPVVMSKAAYMPIRLPAPG
4ZWJ Chain:A ((197-303))
---------------------------FSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLQGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVM
General information:
TITO was launched using:
RESULT:
Template:
4ZWJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69110 for 627 contacts (-110.2/contact) +
2D Compatibility (PS) -10884 + (NN) -8358 + (LL) 2244
1D Compatibility (HY) -12000 + (ID) 1450
Total energy: -99558.0 ( -158.78 by residue)
QMean score : 0.054
(partial model without unconserved sides chains):
PDB file :
Tito_4ZWJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZWJ-query.scw
PDB file :
Tito_Scwrl_4ZWJ.pdb
: