Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIINTSYVEITTFFLVGMPGLEYAHIWISIPICSMYLIAILGNGTILFIIKTEPSLHEPMYYFLSMLAMSDLGLSLSSLPTVLSIFLFNAPEISSNACFAQEFFIHGFSVLES-------SVLLIMSFDRFLAIHNPLRYTSILTTVRVAQ-IGIVFSFKSMLLVLPFPFTLRNLRYCKKNQLSHSYCLHQDVMKLACSD---NR----IDVIYGFFGALCLMVDFILIAVSYTLILKTVLGIASKKEQL--KALNTCVSHICAVIIFYLPIINLAVVHRFARHVSPLINVLMANVLLLVPPLTNPIVYCVKTKQIRVRVVAKLCQRKI |
| 2VT4 Chain:A ((23-284)) | -------------------------------------LLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPI------MMHWWRDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYIPLLIMI-FVALRV-YREAKEQIR---------EHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190741 for 1559 contacts (-122.3/contact) +
2D Compatibility (PS) -23381 + (NN) -8795 + (LL) 5932
1D Compatibility (HY) -24000 + (ID) 3100
Total energy: -244085.0 ( -156.57 by residue)
QMean score : 0.234
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