Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKENSSMVTEFIFMGITQDPQMEIIFFVVFLIVYLVNVVGNIGMIILITTDTQLHTPMYFFLCNLSFVDLGYSSAIAPRMLADFLTNHKVISFSSCATQFAFFVGFVDAECYVLAAMAYGRFVAICRPLHYSTFMSKQVCLALMLGSYL-AGLVSLVAHTTLTFSLSYCGSNIINHFFCEIPPLLALSCSDTYISEILLFSLCGFIEFSTILIIFISYTFILVAIIRMRSAEGRLKAFSTCGSHLTGITLFYGTVMFMYLRPTSSYSLDQDKWASVFYTVIIPMLNPLIYSLRNKDVKAAFKKLIGKKSQ |
2R4S Chain:A ((38-203)) | ----------------------------IVMSLIVLAIVFGNVLVITAIA-FERLQTVTNYFITSLACADLVMGLAVVPFG-----------------FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVFCLKEHKALKTLGIIMGTFTLCWLPFFILNWIGYVNSGFNPLIYCRSPDFRIAFQELLCLRRSSLK-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84588 for 693 contacts (-122.1/contact) +
2D Compatibility (PS) -10729 + (NN) -2334 + (LL) 7416
1D Compatibility (HY) -10000 + (ID) 1500
Total energy: -101735.0 ( -146.80 by residue)
QMean score : 0.222
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