Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METGNQTHAQEFLLLGFSATSEIQFILFGLFLSMYLVTF---TGNLLIILAICSDSHLHTPMYFFLSNLSFADLCFTSTTVPKMLLNILTQNKFITYAGCLSQIFFFTSFGCLDNLLLT-------VMAYDRFVAVCHPLHYTVIMNPQLCGLLVLGSWCISVMGSLLETLTVLRLSFCTEMEIPHFFCDL-LEVLKL----ACSDTFINNVVIYFATGVLG--VISFTGIFFS---YYKIVFSILRISSAG--------RKHKAFSTCGSHLSVVTLFYGTGFGVYLSSAATPSSRTSLVASVMYTM------VTPMLNPFIYSLRNTDMKRALGRLLSRATFFNGDITAGLS |
| 2YCW Chain:A ((13-298)) | ----------------------------GMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-------------HWWRDEDPQALKCYQDPGCCD-FVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFN----RDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153348 for 1708 contacts (-89.8/contact) +
2D Compatibility (PS) -25038 + (NN) -2337 + (LL) 5556
1D Compatibility (HY) -25600 + (ID) 3900
Total energy: -204667.0 ( -119.83 by residue)
QMean score : 0.141
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