Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLESHLIIYFLLAVIQFLLGIFTNGIIVVVNGIDLIKHRKMAPLDLLLSCLAVSRIFLQLFIFYVNVIV-IFFIE-FIMCSANCAILLFINELELWLATWLGVFYCAKVASVRHPLFIWLKMRISKLVPWMILGSLLYVSMICVFHSKYAGFMVPYFLRKFFSQNATIQ-KEDTL--A--IQIF-SFVAEFSVPLLIFLFAVLLLIFSLGRHTRQMRNTVAGSRVPGRGAPISALLSILSFLILYFSHCMIKVFL-S-S---LKF---------HIRRFIFLFFILVIGIYPSGHSLILILGNPKLKQNAKKFLLHSKCCQ |
| 2LNL Chain:A ((37-323)) | ---LNKYVVIIAYALVFLLSLLGNSLVMLVILYSR---VGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIV---HATRTL-TQ-KRHLVKFVCLGCWGLSMNLSLPFFLFRQ---A--YHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM--------------GQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280056 for 1880 contacts (-149.0/contact) +
2D Compatibility (PS) -26298 + (NN) -7920 + (LL) 2888
1D Compatibility (HY) -15200 + (ID) 1650
Total energy: -328236.0 ( -174.59 by residue)
QMean score : 0.234
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