Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASRYVAVGMILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLALRCKGVPQTMAAFGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLRAMLLSFPDVLCLGLMLWVSSSMVCILHRHKQRVQHIDRSDLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDNPNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR |
| 2VQ1 Chain:B ((146-218)) | -------------------------------------------------------------------------------------------------------------------------------------------LVKGYFPEPVTVKWNYGALS----------SGVRTVSSVLQSGFYSLSSLVTVPSSTWPSQTVICNVAHPASKTELIKR--IEPR----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43120 for 438 contacts (-98.4/contact) +
2D Compatibility (PS) -7661 + (NN) 1288 + (LL) 18128
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -37165.0 ( -84.85 by residue)
QMean score : -0.035
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