Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACAATTSLLACLPATQSDIMPSATCCTQLSSYVANNGQDCLCSASTSNTA------------R--SDLALKLPQKCNLKFKAGTTCNVIPGGQ
3OB4 Chain:A ((429-490))
----------------------ERCCNELNEF--ENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRA--PQRCDL-----
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15578 for 284 contacts (-54.9/contact) +
2D Compatibility (PS) -4927 + (NN) -1074 + (LL) 1992
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -23887.0 ( -84.11 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: