Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDYLRISIGSLNEKNFHVIYTNKKY---H---LIAEDLQ-NISTIDQTSLYVKDIIKRV-LLIGSTSIVISHNHSSGNTQPSSRIYPSLGS
2OG4 Chain:A ((2198-2274))
----------DVKIQVAAFIYGMSAKDHPKVKEIKTVVLVPQLGHVGSVQISNIPDIGDLPDTEGLELLGWIHTQTEELKFMAASEV-----
General information:
TITO was launched using:
RESULT:
Template:
2OG4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2511 for 366 contacts (6.9/contact) +
2D Compatibility (PS) -7120 + (NN) 1459 + (LL) 692
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -3958.0 ( -10.81 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_2OG4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OG4-query.scw
PDB file :
Tito_Scwrl_2OG4.pdb
: