Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEQKDKY--RPCVGIMLFNKQG--HVFIGKRFDSDSYWQMPQGGIDDGEKLEQAALRELLEEVGTDKAKIIAKNKDWIYYNLPEEV-IPTCWNGRYSGQKQR----WFLMKFYGEGKDININYTDHPEFKEWRWQSVDNLVAGAIPFKKEVYKTVIEEFSSQIKVSIIK
2O5W Chain:A ((2-122))
----KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTID---VVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQ---IVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN-------------
General information:
TITO was launched using:
RESULT:
Template:
2O5W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38224 for 693 contacts (-55.2/contact) +
2D Compatibility (PS) -12547 + (NN) -7988 + (LL) 1928
1D Compatibility (HY) -9200 + (ID) 1850
Total energy: -67881.0 ( -97.95 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_2O5W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O5W-query.scw
PDB file :
Tito_Scwrl_2O5W.pdb
: