Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQKQYNLGKSLKCKKKSLLTKVKNLLRFQEEKKSVDEKSRDIAKPREIKSEKSIDNKKNELVIAKIY
3EB8 Chain:A ((126-135))
--PKQFNLGKVH--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EB8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1477 for 21 contacts (-70.3/contact) +
2D Compatibility (PS) -1017 + (NN) -6 + (LL) 4624
1D Compatibility (HY) -400 + (ID) 300
Total energy: 1424.0 ( 67.81 by residue)
QMean score : 1.026
(partial model without unconserved sides chains):
PDB file :
Tito_3EB8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EB8-query.scw
PDB file :
Tito_Scwrl_3EB8.pdb
: