Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILFSLLFSQSNTGARVILDKEIFYTELDGKMDLRFSYTFNKDSFNIKPKDKTSSYSYLRLFYLQRVYPNTQMGFNIKAE--VSNISNLKALD--IEKLNMEEWYFIIKNQGLGSIEYGKRNLVSQSMLINTSKIYVAAGGANGYWANYANLLGNEKKDDGAGYDKDEVFWVKPSIYSNYSGLKLKLKQPVVSYISPEI----YNFQLGLSYVPGKNNL----QYNNLVASGLSYKNGLSDDISFTTTLTGEFARGDLADCTNKNPSNLQCHNQLLHWNFGLKLKFFNLDCIFSYGNSGKSGKKLDSEVSSTYYMNAGVAYRSDS-RKLSLTYFSGGQDIIG--KGINKLTSYALSLEYPLFMGTSYYFDIVKFNTEEPKVMNNNSGYILLAGLKLIF |
| 1PHO Chain:A ((1-340)) | ---------------AEIYNKDGNKLDVYGKVKAMHYMSDNAS------K---DGDQSYIRFGF---KGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALYDVE-AWTDMFPEFGGD-S--A---Q--------------TD-N---FMT--K--------RASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDF---G--DFAISGAYTNSDRTNEQNL----QSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 40734 for 2484 contacts (16.4/contact) +
2D Compatibility (PS) -32355 + (NN) 1226 + (LL) 3352
1D Compatibility (HY) 4000 + (ID) 2550
Total energy: 14407.0 ( 5.80 by residue)
QMean score : 0.139
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