Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYPDFTLENKLSGVIAGVDEVGRGPLAGPVMSAAVVFTNRNII-IE--GINDSKKLTAKNRQVLYEKIISVAKFGIGMASVAEINSYNILQATKLSME---RALVNLGIELDYVLVDGNQPPKVKW------------QVKSIVKGDSLSVSVAAASIVAKVARDQLMQELHNQYPEYNWYKNKGYGTKGHIDAI--NLYGVTEHHRKSFAPILNSTKRALL
1X1P Chain:A ((3-202))
---------------IAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVLDDYVILELPPDVIGSREGTLNEFEVENFAKALNSLKVKPDVIYADAADVDEERFARELGERLNFEAEVVAKHKADDIFPVVSAASILAKVTRDRAVEKLKEEYGEI----GSGYPSDPRTRAFLENYY--REHG--EFPPIVRKGAGAII
General information:
TITO was launched using:
RESULT:
Template:
1X1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81523 for 1412 contacts (-57.7/contact) +
2D Compatibility (PS) -19349 + (NN) -9577 + (LL) 1260
1D Compatibility (HY) -12400 + (ID) 3000
Total energy: -124589.0 ( -88.24 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_1X1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X1P-query.scw
PDB file :
Tito_Scwrl_1X1P.pdb
: