Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNIIHPNLEKSINNWFETQFNSLTLPFYNSIDLRNSGYKIAPIDANLFPAGFNNLSEMSKATTAELMRSYFEGKQHKRVLIIPENYTRNKMYIENVFAIEVILQQAGFETRIGLFHNEAYNLIEPYETIVKENSLLKTTSGFMPDVIILNRDMTSHIPDMLENVKQEIIPSPLYGWHSRQKFKYFKIYKKLVSEFCSEFKIDPWLISAFTEGCDEVDFNDDSPLETVATKVDQVLSLVQKKYEEYGIKTQPYVFIKASNGTYGMGIITATSGEEILTLNKKKRHKMKKIKEGIEVNSVIIQEGVPTIDIFECSPAEPLIYYIGNTPTCYLYRCNSRKDIYSSLNSTNCKFYDVSQVVENKTLSLWGTVSKLAVLALAVEMRSFHI |
| 3VPB Chain:A ((124-195)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIDKPPIGSWGRLVSLIRDVFEGKTIIEHREL-----MGNSALKAHIVQEYIQYK------GRDIRCIAIGEELLGCYARNIPPNEWRANVALGGTPSNIEVDEKLKETVVKAVSIVHGEFVSIDILEHPNKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9926 for 355 contacts (-28.0/contact) +
2D Compatibility (PS) -7891 + (NN) -5653 + (LL) 18624
1D Compatibility (HY) -400 + (ID) 550
Total energy: -5796.0 ( -16.33 by residue)
QMean score : 0.195
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