Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKLTTKIASLKLFASYAIATYILVMLTSALNLFKGYVADTFYIAETLLIILTIILIIILTTEQTWKHHDLWRRIVEVLLLLMALTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKTTRHRIAIIGLLILVYMLTLSIVSQFTFDTTLATKNQFNALLHGPSLAYPFGTDDFGRDLF-----TRVVVGTKLTFSISIISVVIAVIFGVLLGTIAGYFN-HIDNLIMRILDVVFAIPSLLLAVAIIASFGA-------------------------SIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAP---------DVAEWGNILRTGSNY--LETHSNLAIVPGVCIMFVVLAFNFIGDAVRDALDPRIH |
| 3RLF Chain:F ((251-503)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------LSPGYTVTTGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAI-PDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAI-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135502 for 1424 contacts (-95.2/contact) +
2D Compatibility (PS) -21381 + (NN) -813 + (LL) 18404
1D Compatibility (HY) -15600 + (ID) 1750
Total energy: -156642.0 ( -110.00 by residue)
QMean score : 0.167
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