Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPMQVLNVLEDYYKRYNS--NVHRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVEEGDEIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVHPHDVATAVDTEGVAVRAGHHCAQP------LMKWLNVS-----STARASFYIYNTKEDIDQLINALKQTKEFFSYEF |
| 3LVJ Chain:A ((25-395)) | ----------------------------YLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADP-REIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGH--------------ERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERL-RGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMAL--KDLAVSSG------SLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKS-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -188537 for 3096 contacts (-60.9/contact) +
2D Compatibility (PS) -38054 + (NN) -8941 + (LL) 4488
1D Compatibility (HY) -20000 + (ID) 4450
Total energy: -255494.0 ( -82.52 by residue)
QMean score : 0.508
|
|
|