Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKNIIIKSIAALTILTSVTGVGTTMVEGIQQTAKAENTVKQITNTNVAPYSGVTWMGA--------GTGFVVGNHTIITNKHVTYHMKVGD--EIKAHPNGF----YNNGGGLYKVTKIVDYPGKEDIAVVQVE-EKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNK--LQMYESTGKVLSVNGNIVSSDAIIQPGSSGSPILNSKHEAIGVIYAG--NKPSGESTRGFAVYFSPEIKKFIADNLDK |
1QY6 Chain:A ((6-211)) | -------------------------------------NDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVV-DATHGDPHALKAFPSAINQDNYPNGG--FTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNN--AETQTNQNITVTGYP---GDKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNG------AVFINENVRNFLKQNIE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QY6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47207 for 1563 contacts (-30.2/contact) +
2D Compatibility (PS) -21022 + (NN) -9663 + (LL) 3760
1D Compatibility (HY) -10800 + (ID) 3500
Total energy: -88432.0 ( -56.58 by residue)
QMean score : 0.493
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