Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEQQTIEQIKARLNKFIEDIDHVNPDEVRVEDIDEWIGLLDQLEEKVKLVSK
1LJ2 Chain:A ((52-81))
--------EIKADIEQQINSIDAINP-LHAFDDLESVIR--------------
General information:
TITO was launched using:
RESULT:
Template:
1LJ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 738 for 129 contacts (5.7/contact) +
2D Compatibility (PS) -3237 + (NN) -431 + (LL) 2260
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -3970.0 ( -30.78 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_1LJ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LJ2-query.scw
PDB file :
Tito_Scwrl_1LJ2.pdb
: