Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVINVVGAIIFSDNKILCAQRSEEMSLPLMWEFPGGKIEKNETEKEALIREIREEMKCDLIVGDKVITTEH-------EYDFGIVKLTTYKCTLNK--ELPTLTEHKSIEWLSINELDKLNWAPADIPAVNKIMTEG
3A6T Chain:A ((3-126))
--KLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVG---------ITPQHFSLFEKLEYEFPDRHITLWFWLVERWEGEPWGKEGQPGEWMSLVGLNADDFPPANEPVIAKL----
General information:
TITO was launched using:
RESULT:
Template:
3A6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39257 for 813 contacts (-48.3/contact) +
2D Compatibility (PS) -12207 + (NN) -602 + (LL) 1024
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -58592.0 ( -72.07 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_3A6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A6T-query.scw
PDB file :
Tito_Scwrl_3A6T.pdb
: