Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKKMCLSLLMISGVCVGAKDLDFKLDYRATGGKFMGKMTDSSLLSITSMNDEPV--VIKNLIVNRGNSCEATKKVEPKFG----DKFKKEKLFDHELKYSQQIFYRLDCKPNQLLEVKIITDKGEYYHKFSK |
4WW0 Chain:A ((427-471)) | ---------------------------------------------AIVEEYKEPLKAVVKKLLEKETITCEEFVEVFKLYGIELKDKCKK------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3037 for 177 contacts (17.2/contact) +
2D Compatibility (PS) -4116 + (NN) -478 + (LL) 6352
1D Compatibility (HY) -3200 + (ID) 700
Total energy: 895.0 ( 5.06 by residue)
QMean score : 0.107
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