Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILMMENRMPKEIQKTEASEKSIEKVLNAYDKQQHHHQDALAIQYLPAVRAMAFRLKERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYA----KTRVNGAMLDYLRSLDV----------ISRSSRKLIKSIDIEITKYLNEHGKEPSDEHLAEALGENIEKIREAKT---ASDIYAL-VPIDEQFNAIEQDEI------------TQKIEAEELLEHIQKVLNQMSEREQILIQLYY----FEELNLSEIKEILGITESRISQIIKEVIKKVRQSLGVNHG |
| 4OIP Chain:F ((226-429)) | --------------------------------------------------------------GLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQLQQEL-----------GREPTYEEIAEAMGPGWDAKRVEETLKIAQEPVSLETPIGDEKDSFYGDFIPDEHLPSPVDAATQSLLSEEL----EKALSKLSEREAMVLKLRKGLIDGREHTLEEVGAFFGVTRERIRQIENKALRKLKYHESRTRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29532 for 929 contacts (-31.8/contact) +
2D Compatibility (PS) -18074 + (NN) -7657 + (LL) 7412
1D Compatibility (HY) -8800 + (ID) 2800
Total energy: -59451.0 ( -63.99 by residue)
QMean score : 0.480
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