Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKKTFFVSLALALSLNAGNIQIQNMPKVKERISVPSKEDTIYSYHDSIKDSIKAVVNISTEKKIKNNFIGGGVFNDPFFQQFFGDLGGMIPKERMERALGSGVII-SKDGYIVTNNHVIDGADKIKVTIPGSNKEYSATLVGTDSESDLAVIRITKDNLPTIKFSDSNDILVGDLVFAIGNPFGV-GESVTQGIVSALNKSGIGINSYENFIQTDASINPGNSGGALIDSRGGLVGINTAIISKTGGNHGIGFAIPSNMVKDIVTQLIKTGKIERGYLGVGLQDLSGDLQNSY---DNKEGAVVISVEKDSPAKKAGILVWDLITEVNGKKVKNTNELRNLIGSMLPNQRVTLKVIRDKKERTFTLTLAERKNPNKKETISAQNGVQGQLNGLQVEDLTQKTKRSMRLSDDVQGVLVSQVNENSPAEQAGFRQGNIITKIEEVEVKSVADFNHALEKYKGKPKRFLVLDLNQGYRIILVK |
| 3PV3 Chain:A ((17-437)) | ----------------------------------------NMPSMAPVLKNIMPAIVNVAVQGYLPN--------------------------GRKFESIGSGVIIDPNNGVIITNDHVIRNASLITVTL-QDGRRLKARLIGGDSETDLAVLKIDAKNLKSLVIGDSDKLEVGDFVVAIGNPFGLNSQSATFGIVSALKRSD------ENFIQTDAAINPGNAGGALVNAKGELIGINTAILS-----VGIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQK--LQSNNPF---LYGLALRAFEQESPP----HGNVIGVQVVGASENSAGWRAGIRPGDIIISANK---KPVTDVKSLQTIAQEKKKELLVQVLRGPGSMYLLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147430 for 2940 contacts (-50.1/contact) +
2D Compatibility (PS) -39665 + (NN) -9125 + (LL) 4648
1D Compatibility (HY) -32800 + (ID) 7800
Total energy: -232172.0 ( -78.97 by residue)
QMean score : 0.460
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