Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSDLEKPTIIYPCVWDYRVIMTTNDTSVLKELLETYQRPFKLELKNTSK--NAKFYSFNVSMEVSNEAERNEIFQKISQLEVVAHAL
2XCQ Chain:A ((1394-1458))
-------------------IISTIRESDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELETI----
General information:
TITO was launched using:
RESULT:
Template:
2XCQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4131 for 294 contacts (14.1/contact) +
2D Compatibility (PS) -6650 + (NN) -755 + (LL) 1608
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -3766.0 ( -12.81 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_2XCQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XCQ-query.scw
PDB file :
Tito_Scwrl_2XCQ.pdb
: