Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIGVYIISLKESQRRLDTEKLVLESNEKFKGRCVFQIFDAISPKHQDFEKLLQELYNAQSLLQSDWYHSYVGAGLTLPELGCYLSHYLLWKECVKLDQPVVILEDDVTLESHFMQALEDCLKSPFDFVRLYGCYWYYHETKFHVLPKEFVFPPFDHSFKNNPILEKFKKFFDVSRFLNLSTHKVIHYILKKIQKSYYATHEKEAFFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATESFKIIEPVDMFMDNSAYHDVANLTYVPCPVSLSE--HSLDSTIQKPQKKSLKSYPLPPQKSTFKNLFYYSLNAKKRLNAFQQYSKQYAPLKTPKEV |
3J16 Chain:B ((503-597)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVFEGIPSKNAHARAPES--LLTGCNRFLKN------LNVTFRRDPNSFRPRINKLDSQMDKEQKSSGNYFFLDNTGI----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 557 for 492 contacts (1.1/contact) +
2D Compatibility (PS) -9475 + (NN) 2398 + (LL) 16720
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: 2550.0 ( 5.18 by residue)
QMean score : 0.050
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