Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFYDEKKTYQRIEERLEVISSFNAHNEHKNLQDEFKGAGISRRDLLKWAGMMSVTLALPASFAPLTLKAVEVANRLPVIWLHMAECTGCSESLLRSADPTIDSIIFDYINLEYHETIMVASGFQAEKSLHDAIEKHKNNYILMVEGGIPQGTE--YFLTQGPNAETGAEECRKVAQHAAAIFAIGTCSSFGGVQAAYPNPSNAQPLHKII-DKPVINVPGCPPSEKNIVGNVLYYLMFGTLPKLDAYNRPSWAYGNRIHDLCERRGHFDAGEIVEHFGDENAKKGFCLYKMGCKRPYTFNNCSKLRFNSHTSWPIGAGHGCIGCSEPNFWDTMSPFEEPLANRSIKTAFDGLGADKVADKVGTTLLSATAIGIAAHALLSKAIKNKE |
| 4C3O Chain:B ((4-266)) | ------------------------------------------------------------------------KPRTPVIWLHGLECTCCTESFIRSAHPLAKDAILSLISLDYDDTIMAAAGQQAEQALADVMREYKGNYIVAVEGNAPLNEDGMFCILAG---EPFLEKLKRVSADAKAIIAWGSCASWGCVQAARPNPTKATPVHKLITDKPIIKVPGCPPIPEVMSAVITYMLAFDRIPPLDRLGRPKMFYGQRIHDKCYRRAHFDAGQFVEAWDDEGARKGYCLYKMGCKGPTTYNACSTVRWNDGVSFPIQSGHGCLGCSEDGFWDYGSFYSR------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138285 for 2182 contacts (-63.4/contact) +
2D Compatibility (PS) -27773 + (NN) -14625 + (LL) 9172
1D Compatibility (HY) -24000 + (ID) 6600
Total energy: -202111.0 ( -92.63 by residue)
QMean score : 0.336
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