Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKGSLAIVLGSLLASGTFYTALADGMPMKQQHNNMGESVELHFHYPIKGKQEPKNNHLVVLIDPKIEANKVIPENYQKEFEKSLFLQLSNFLERKGYSVSQFKDVSEIPQDIKEKALLVLRMDGNVAILEDIVEESDALSEEKVIDMSSGYLNLNFVEPKSEDIIHSFGIDVSKIKAVIERVELRRTNSGGFVPKTFVHRIKETDHDRAIKKIMNQAYHKVMAHITKELSKKHMERYEKVSSEMKKRK |
2H0A Chain:A ((75-101)) | ------------------------------------------------------------------------------TEFYRRLVEGIEGVLLEQRYDLALFPI------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2434 for 104 contacts (-23.4/contact) +
2D Compatibility (PS) -2980 + (NN) -1977 + (LL) 16420
1D Compatibility (HY) -3200 + (ID) 300
Total energy: 5529.0 ( 53.16 by residue)
QMean score : 0.621
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