Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNELLKIFLSMALTSVILIPLVWILRRIFNRYLSKGKIYYSWLIVFFFLTIPFAYIFFSFTKDNAFMWRNKTEFDGVTSIVMDQSGIVLQHDFKTVFWMTVLDYIWVAWLVIFLLTFIYRIASYRNFKKYVFSGARRVDDLEQLDILAETIEELNIKRPVELMINP-LISSPIFLGLKK-NVIVIPDE---TFSNVELHYIFKHELVHCKRKDMYYVWMVQFFTCIYWFNPLMYLMNKRIQMDRELACDEAVLATLSKSKYIGYGDTLLSSLAKSGNYKESYVAVSLHENTKALKERLMFIANYKAQNKKHNILFSISMIVLCIVGVLFSAFQADVFTLEKKKGITIERRK |
| 3CQB Chain:A ((24-106)) | ------------------------------------------------------------------------------------------------------------------------------------------TEHWLLETVGRQAQQAGIGM-PTVAIYDSADINAFATGAK-DSLVAVSTGLLHNMTRDEAEAVLAHEVSHIANGDMVTMTLMQ---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45462 for 516 contacts (-88.1/contact) +
2D Compatibility (PS) -8479 + (NN) -2358 + (LL) 25236
1D Compatibility (HY) -400 + (ID) 600
Total energy: -32063.0 ( -62.14 by residue)
QMean score : 0.426
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