Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVDFGSKLLIESFELETKIG-------KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDNVTAN-DYQAIISNPPIRAGKKIV----HAILEGAYDHLQETGELWIVIQKKQGGPSAEKKMEEVFGNVETVAKDKGYFIFKSVKN
2ZWV Chain:A ((187-360))
-----------------RAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEA--LQERLGPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALH-SDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL---KYEPLLEEKFGAFQTL--------------
General information:
TITO was launched using:
RESULT:
Template:
2ZWV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58789 for 1295 contacts (-45.4/contact) +
2D Compatibility (PS) -17709 + (NN) -8303 + (LL) 1324
1D Compatibility (HY) -12000 + (ID) 2250
Total energy: -97727.0 ( -75.46 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_2ZWV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZWV-query.scw
PDB file :
Tito_Scwrl_2ZWV.pdb
: