Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKTVHGWEIISSLDVRVYQDEAGGVAILVDRDNFGDQVPVLLNFGDDGVDIKALSHLTKSVRVSLDKKVRIEWHDEYFEERTQAMECIEVERD
1G3W Chain:A ((123-179))
-----------------------------VSRSPFGNPIPGLDELGV-------PGTRVIDAATSMPRKVRIVQINEIFQVET-----------
General information:
TITO was launched using:
RESULT:
Template:
1G3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1007 for 161 contacts (-6.3/contact) +
2D Compatibility (PS) -4722 + (NN) 2231 + (LL) 3944
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -1504.0 ( -9.34 by residue)
QMean score : 0.009
(partial model without unconserved sides chains):
PDB file :
Tito_1G3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3W-query.scw
PDB file :
Tito_Scwrl_1G3W.pdb
: