Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKES-GDIKDQHFTDIISYLNEGDALVLNDTRVLPARLHGIKDETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITFGDG-------ALKATCLEELEHGGRILEFSYEGIFYEVLEQLGEMPLPPYIKEQLADQDRYQTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFIH |
| 1WDI Chain:A ((3-345)) | -GLEAYDYHLPPEQIAQEGVEPRDMARLMVVYREGPFRVAHKRVRDLPEFLRPGDVLVFNESKVIPARLLARKP-TGGKVEILLVRER------ALLGPARKAPPGTRLLLLSPKDLAPVPGLQAEVVAVEED------------LVAHLEEVGEVP--------------------------AAPTAGLHFTPELLERLREMGVELRFLTLHVGPGTFRP----------MHAEPYAIPEEVAEAVNRAKAEGRRVVAVGTTVVRALESAYRE-GVGVVAGEGETRLFIRPPYTFKVVDALFTNFHLPRSTLLMLVAAFLGRERTLEAYRLAVAEGYRFYSLGDAMLIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174423 for 2217 contacts (-78.7/contact) +
2D Compatibility (PS) -29988 + (NN) -1591 + (LL) 3244
1D Compatibility (HY) -29200 + (ID) 6800
Total energy: -238758.0 ( -107.69 by residue)
QMean score : 0.559
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