Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNYVALLRAVNVAGKNKVNMKNLKGALEEEGFQNVVTYIQSGNLVLSSILQTETEVAAKITKVIKAICELTIDVFVFSEQNYKQIIANNPFPPETIGEEERWMAAFYNENIDIPRQKNDQAEVIAIGRVLYVHVFSNQIHTLKLPVFLGQYKMALTTTRNWRTTLQLKTLLDSQE |
1TPL Chain:A ((177-270)) | ---YICLAVTVNLAGGQPVSMANMRAVRELTAAHGIKVFYDATRCVENAYFIKEQEQGFE----NKSIAEIVHEMFSYAD------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9482 for 499 contacts (-19.0/contact) +
2D Compatibility (PS) -7532 + (NN) 2476 + (LL) 8004
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -11384.0 ( -22.81 by residue)
QMean score : 0.336
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