Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKKIRTVLGDISKESLGFTYSHEHLWCCPPSVQKDRDF-ELTDYESSLEE-----LKTFQSIGGQTLVDASTLDYGRDGNKLKTMSEESGVNVLGVTGFNKHIYF--PDWVQEESIEQITDRLIYDIEKGMDGSDARAGILKSGSWYNLIHPLENKVTRAVAWAQKETGAPIWLHTEAGTM-GQEMLAILEEEGVNMELVAVGHSDRNADPYYHLKLAEKGAYVQFDGCGKVKYYPDS-----------TRVELVKNMLENGFGDKLLISGD--MGRKSYLHAYG------GGPGFRFIKTKFIPRLLEEGVTEQQIQTIFYDNPANWLAKF |
| 1PTA Chain:A ((36-359)) | ---RINTVRGPITISEAGFTLTHEHI--CGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATG----LWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVAT-TGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLD------HIPHSAIALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PTA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89551 for 2430 contacts (-36.9/contact) +
2D Compatibility (PS) -31436 + (NN) -16769 + (LL) 1132
1D Compatibility (HY) -17200 + (ID) 5000
Total energy: -158824.0 ( -65.36 by residue)
QMean score : 0.485
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