Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLRKFQVKAFTVLESLIVLSVVAFMTLVFSTSFNNIFRQVEETIFFISFEHLYRDTQKLSAFGQKKQTLTISHNYLENTYERLYLPKTVKVVKSDTLAFDANGGNSSLAKIQFECYRKTVTYQLYIGSGNYRKKEN
4PQZ Chain:A ((33-59))
---------------------------LQFDKVSQNVFEQVKETIFF-AIDHTLR----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4PQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1244 for 100 contacts (-12.4/contact) +
2D Compatibility (PS) -2563 + (NN) 1508 + (LL) 8864
1D Compatibility (HY) -2800 + (ID) 650
Total energy: 3115.0 ( 31.15 by residue)
QMean score : -0.008
(partial model without unconserved sides chains):
PDB file :
Tito_4PQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PQZ-query.scw
PDB file :
Tito_Scwrl_4PQZ.pdb
: