Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MSFIIRKGKILALLIAFLV-----INQLVPIL----AVWLLKNHYQTPFTSILLIGLELLIIALFLY-YAKVKQIIRWKALL-----TRKALVTIFLGWL-S--L-RVPQIIGYLIMTMQGVK---------------DTANQTVIMELTKQLPLALMLI--F-TIIGAPIMEEI------IFRYIIP-----KELFAKHQKWGFVIGTLAFALIHSPSD---IGSFIIYAGMGAILSFVYYKTEHLEYSIMVHFINNALAYSVLI---STMMNN |
| 3LOU Chain:A ((8-292)) | PHQFVLTLSCPSAAG-QVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDLRVDALRREFEPIAERFRMQWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHGLPFRHFPITADTKAQQEAQWLDVFETSGAELVILARYMQVLSPEASARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQVVERVDHSYRPEQLLAVGRDVECITLARAVKAFIERRVFLNGDRTVVFQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -215882 for 1446 contacts (-149.3/contact) +
2D Compatibility (PS) -23429 + (NN) -2370 + (LL) 64
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -247267.0 ( -171.00 by residue)
QMean score : 0.183
|
|
|