Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELLKTPIFGICFSLILYTIGQHLFKKSKGFFLLQPLFFAMVSGIV----ILWLMSKGLGTDVKTFYTQAYKPGGDLIFWFLNPATIAFAVPLYKKND----VVKKYWVEILSSLVIGMIVSLMLIVAISKMVGLS------------QVGIASMLPQAATTAIALPITAAIGGNTAVTAMACILNAVI----------IYALGKKLVSFFH-LNDSKIGAGLG-----LGTSGH----------TVGAAFALELGELQ----GAMAAIAVVVIGLVVDLVIPIFSHLIGLL------ |
| 19HC Chain:A ((1-292)) | AALEPTD-SGAPSAIVMFPVGEKPNPKGAA---MKPVVFNHLIHEKKIADCETCHHTGDPVSCSTCHTVEGKAEGDYIT--LDRAMHATDIAARAKGNTPTSCVSCHQSETKERRECAGCHAITTPKDDEAWCATCHDITPSMTPSEMQKGIAGTLLPGDNEALAAETVLAEATVAPVSPMLAPYKVVIDALADKYEPSDFTHRRHLTSLMESIKDDKLAQAFHDKPEILCATCHHRSPLSLTPPKCGSCHTKEIDAADPGRPNLMAAYHLECMGCHKGMAVARPRDTDCTTCHKAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 19HC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163095 for 1432 contacts (-113.9/contact) +
2D Compatibility (PS) -23144 + (NN) 6815 + (LL) 932
1D Compatibility (HY) 3200 + (ID) 2200
Total energy: -177492.0 ( -123.95 by residue)
QMean score : 0.067
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