Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLEAKKLGFYHKKDQ-WLFKEINLEVAPGQVLGIFGQSGCGKTSLSKVLAGFLHPRSGEVLVDGSNL----PNKAFRPVQLIQQHPE----------KTMNPLWPMKKSLEEAYYP-SRDLLDAFGIQEKW---LNRRPSELSGGELQRFSIVRSLHPETKYLIADEMTTMLDSITQASVWKSLLEIVKDRNLGLIVISHDFAMLEKLCNQCYMIEENRIVSFNGD
2FF7 Chain:A ((11-222))
-----RNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISE--LREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGRT--VIIIAHRLSTV-KNADRIIVMEKGKIVEQGKH
General information:
TITO was launched using:
RESULT:
Template:
2FF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101102 for 1402 contacts (-72.1/contact) +
2D Compatibility (PS) -20096 + (NN) -2753 + (LL) 752
1D Compatibility (HY) -17200 + (ID) 3150
Total energy: -143549.0 ( -102.39 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_2FF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FF7-query.scw
PDB file :
Tito_Scwrl_2FF7.pdb
: