Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSPEERYSSLRRFATEIRLNTLETLNHLGFGHYGGSLSIVETLAILYGDIMDINPEKFKESDRNYMVLSKGHAGPALYSTLYLKGF-FDKTFLHSLNTNGTKLPSHPDRNLTPGIDVTTGSLGQGISIATGIAYAQKIENSSY----------YTYTIVGDGELNEGQCWEAIQFAAHHQLHHLIVFVDDNKKQLDGLTADICNPGDFVAKFEAFGFDAVRVK--GDDIEAIDKAIKTFQDSNSVKPKCIVLDSIKGQGVKELEELASNHHLRPDLQQKTMLERAVISLRESLEVVE |
| 1TKA Chain:A ((11-251)) | ---------------STIRILAVDTVSKANSGHPGAPLGMAPAAHVLWSQ-MRMNPTNPDWINRDRFVLSNGHAVALLYSMLHLTGYDLSIEDLKQFRQLGSRTPGHPEFEL-PGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDDNKITIDGATS-ISFDEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKLSKD-KPTLIKMTTTIGYGSLHAGSHSVHGAPLKADDVKQLKSKFGFNPDKSFVVPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94920 for 1913 contacts (-49.6/contact) +
2D Compatibility (PS) -25528 + (NN) -16592 + (LL) 1460
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -153180.0 ( -80.07 by residue)
QMean score : 0.526
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