Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTNELDIRLRAFINAPDNFLDSIGLVNALHHSTVWASKEPYAIQVDGQEVVPVFTDITDLNHFKEEQESARDMFWESRRSLDV-LDEAISHGLSGLVYNLKKEGDFGNSTIFYCEDMVQFMNNYTTILNQLLNEDNIVADIMDKTYLVPAFVHPREEGSFDRFFPTMSTPEGKSYVPVFSNLLSFEKWYNHNDFGGAFRKAQGVILAWTIDDIYKPRNGENEIDDTFGVAINPFDEQQVLVDWSDVEND |
| 1D9V Chain:A ((1-78)) | ---------------------------------------------------------DITVYNGQHKEAATAVAKAFEQETGIKVTLNSGKSEQLAG---QLKEEGDKTPADVFYTEQTATFAD---------LSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKDMEKSVLDYATPKWKGKIGYVSTSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAKNSVALQAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4023 for 460 contacts (-8.7/contact) +
2D Compatibility (PS) -8205 + (NN) -3276 + (LL) 5204
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -14000.0 ( -30.43 by residue)
QMean score : 0.137
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