Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNLDILYCKLAMCTTLLTERLRLQPVDLSNINDFLEFS-SDSETVFYMQRYKANTTEEAQMVLANVCMKSPLGIYAMIETESNKMIGIIELEIRDEFSAEFGYILNKNYSGKGYMTEACSKLMSVGFEYLDLERIYARFDINNKKSGNVMERLGMKKEGEL-RHLAKNPKGEWKTRAYYSILKEEYFNKVNTK
2ZW6 Chain:A ((7-163))
-----------AHTAHLRTARLELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTS-CAAAPGARLWTIRAPDGTVPGMAGLLGGTDVPG-LTWLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPGPHEMVVLGKARAEEPLTTLAVIT
General information:
TITO was launched using:
RESULT:
Template:
2ZW6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92708 for 1155 contacts (-80.3/contact) +
2D Compatibility (PS) -16308 + (NN) -2646 + (LL) 1264
1D Compatibility (HY) -2800 + (ID) 1900
Total energy: -115098.0 ( -99.65 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_2ZW6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZW6-query.scw
PDB file :
Tito_Scwrl_2ZW6.pdb
: