Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKECRDFYRQIQHTYNDIAVREDAVLSSILLSASNGLIKTSDVPRVAYELTQQLENNEIEKSFESLATVKELKKSAKKLSERYEQNKVTTGLLSKVFGNH
1U6H Chain:B ((5-27))
---------------------------SRKLLSAAKILADATAKMVEAAKG--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1U6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3416 for 82 contacts (41.7/contact) +
2D Compatibility (PS) -2241 + (NN) 1360 + (LL) 6260
1D Compatibility (HY) 800 + (ID) 350
Total energy: 9245.0 ( 112.74 by residue)
QMean score : -0.253
(partial model without unconserved sides chains):
PDB file :
Tito_1U6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U6H-query.scw
PDB file :
Tito_Scwrl_1U6H.pdb
: