Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQI------DKGNKS-----MPIDYIRKNGFFVKESAFPQ--VPYLDIIEEKLLGGDYN |
| 3KSK Chain:A ((64-172)) | ---------------------------------------------------------------------------------------------QEYELKSINIDLTKGFSTHHHMNPVIIAKYRQVPWI-FAIYRGIAIEAIYRLEPKDLEFYYDKWERKWYSDGHKDINNPKIPVKYVMEHGTKIYGSGGSHPDLNKLLELWPHIQEYQDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24652 for 561 contacts (-43.9/contact) +
2D Compatibility (PS) -9737 + (NN) 1074 + (LL) 6704
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -30311.0 ( -54.03 by residue)
QMean score : 0.372
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