Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANDWKKSARGLALMTLEEVFDKGAYSNIALNKSLKKSRLSDKDRALVTEIVYGTVARKITLEWYLSHFIVDRDKLELWVYHLLLLSLYQLLYLDNIPDHAIVNDAVTIAKNRGNKKGAEKLINAVLRRVSSETLPEIASIKRQNKRYSVAYSMPVWLVKKLIDQYGETRALAIMESLFERNKASLRVTDLSQKQTIKETLNVRDSHIAETALVADSGNFASTSFFQDGLITIQDESSQLVAPTLKVSGNDQVLDACSAPGGKTSHIASYL-TTGAVTALDLYDHKLELVMENAKRLGLS--DKIKTKKLDASKAHEYFLEDTFDKILVDAPCSGIGLIRRKPDIKYNKANQDFEALQEIQLSILSSVCQTLRKGGI--ITYSTCTIFEEENFQVIEKFLENHPNFEQVELSHTQEDIVKRG---------CISISPEQYHTDGFFIGQVKRIL |
| 2B9E Chain:A ((40-301)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHY--ILLDPSCSG----------------VRLHALAGFQQRAL---CHALTFPSLQRLVYSTCSLCQEENEDVVRDALQQNPG--AFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIERV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91475 for 1776 contacts (-51.5/contact) +
2D Compatibility (PS) -24728 + (NN) -10594 + (LL) 17176
1D Compatibility (HY) -15200 + (ID) 3450
Total energy: -128271.0 ( -72.22 by residue)
QMean score : 0.377
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