Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYKTIKSDGIVEEEIKKSRFICHLKRVESEEEGRNYITQIKKAHYKANHSCSAMVIGEKGDIKRSSDDGEPSGTAGIPMLTVLEKQGLTNVVAVVTRYFGGIKLGAGGLIRAYSGSVANTIKEIGVVEVKEQIGIRIQLTYPQYQTFDNFLKEHHLQEFETEFL---EAVTCKIYVDPKEFEHTITNLTEFYQGKALLTEEGSQIVEIPFKAETDK |
3JB9 Chain:B ((817-924)) | --------------------------------------------------------------------------------------------------------RGGGQIIPTARRVCYSSFLTASPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVIDSCGFETDLRVHTQGQAMCQMVFDHWQVVPGDPLDKS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3JB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -37231 for 643 contacts (-57.9/contact) +
2D Compatibility (PS) -11171 + (NN) 263 + (LL) 6512
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -44127.0 ( -68.63 by residue)
QMean score : 0.206
|
|
|