Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIMEKYTSIKQSGRHYGLDLLRIISMFMIVITHVLGKGGLRSSVEGHADSYFIVTWIIQVLVYGA--VNCYALISGYVGINSRYRYSKLLSIWAQVFFYTFTITALFAITGHEVTLLNWRDAFFPIVSGQYWYITAYFGLLVFMPVINNGLNALTDKQLKQLVLLMFIIFSILPAVLNNRVPEFSLSKGFEMTWLLILYIIGAYLKRIDLNIFKTSYLLIIYLLSLVATYAMKFSVGDIWYWYVSPTLTLGAVSLFILFARASIKPSGFLKKIIVVLAPSTLGVYLCHLHPLIVKYFVRDFAETFVYESIYLYPFLILGAGILIYLLAFIVERIRLRIFKAIHFSNFLRWFDDKFPY |
1B35 Chain:A ((1-260)) | -VMGEDQQIPRNEAQHGVH---------------------PISIDTHRISN---NWSPQAMCIGEKVVSIRQLIKRFGIFGDANTLQADGSSFVVAPFTVTSPTKTLTSTRNYTQFDYYYYLYAFWRGSMRIKMVAETQDGTGTPRKKTNFTWFVRMFNSLQDSFNSLISTSSSAVTTTVLPSGTINMGPSTQVI-----------------------------DPTVEGLIEVEVPYYNISHITPAVTIDDGTPSMEDYL-----KGHSPPCLLTFSPRDS---ISATNHIITASFMRALGDDFSFMYLLGVP----------------------------PLVNVARA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172708 for 1706 contacts (-101.2/contact) +
2D Compatibility (PS) -26689 + (NN) 6484 + (LL) 10512
1D Compatibility (HY) 3600 + (ID) 1750
Total energy: -180551.0 ( -105.83 by residue)
QMean score : 0.028
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