Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQSLNKTVEFQTTGVSYLGMGNKVGKFLVGDQALEFYNDKNV------NDYIQIPWTSINQIGANVSRKKISRHFEVFTDQGKFLFASKDSGTILKHARRHIGDDKVVKLPTLIQTILKIFKFKK
2Z6B Chain:D ((22-112))
-AWSNNRFVELAAT-ITTLTMRDSL--YGRNEGMLQFYDSKNIHTKMDGNEIIQISVANANDINNVKTRIYGCKHFSVSVDSKGDNIIAIELGTIHSIENLKFGRPFFPDAGESIKEMLGVIYQDR
General information:
TITO was launched using:
RESULT:
Template:
2Z6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1848 for 464 contacts (-4.0/contact) +
2D Compatibility (PS) -8468 + (NN) 2406 + (LL) -72
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -13332.0 ( -28.73 by residue)
QMean score : 0.063
(partial model without unconserved sides chains):
PDB file :
Tito_2Z6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z6B-query.scw
PDB file :
Tito_Scwrl_2Z6B.pdb
: