Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGTVNIQVEIDPEAYVTGLEHAKETKLMPEELLEGENNG
1G5J Chain:B ((1-25))
-------------NLWAAQRYGRELRRMSDEFVDSFKK-
General information:
TITO was launched using:
RESULT:
Template:
1G5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2928 for 94 contacts (31.1/contact) +
2D Compatibility (PS) -2795 + (NN) -934 + (LL) 740
1D Compatibility (HY) -1200 + (ID) 150
Total energy: -1411.0 ( -15.01 by residue)
QMean score : 0.197
(partial model without unconserved sides chains):
PDB file :
Tito_1G5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G5J-query.scw
PDB file :
Tito_Scwrl_1G5J.pdb
: