Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNKFLLVSIVFIIIFVVQPQNFQSLKNIFTQNDIASQLNISSSPEEKNDGLGTAYQTQNEDLKSKSFDGQHQVIVVNEKAQFTAEELSMRNGSWEKYDNLDFLNRVGVAEAMLGKELMPKEARQDIS--SVKPTGWKNKKITFNGKQDYLYNRSHLIGFQLSG-------ENANVKNLFTGTRALNANFNDDKSSMVYYENEVANYIKKTNHHVRYRVTPLFKN-VELVARGVRIEAQSIEDETISFDVYIFNGQPGYDIDYLTGSSEKIMITK |
4QH0 Chain:C ((57-220)) | -----------------------------------------------------------------------------------------------------IDNQQRPSTANAMLDRTIRQYQNRR---DANWKPLGWH--QVATNDHYGHAVDKGALIAYALAGNFKGWDASVSNPQNVVTQTAHSNQSNQKINRGQNYYESLVRKAVDQ-NKRVRYRVTPLYRNDTDLVPFAMHLEAKS-QDGTLEFNVAIPNTQASYTMDYATGEITLN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QH0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41270 for 1137 contacts (-36.3/contact) +
2D Compatibility (PS) -15869 + (NN) -2592 + (LL) 7344
1D Compatibility (HY) -6400 + (ID) 2600
Total energy: -61387.0 ( -53.99 by residue)
QMean score : 0.346
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