Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFIPFKKSNKCVVTDELFLEVTWEDGKPPEDDSELLGIIEGLEQQYLDSFQHSIEESLPYMTFQQAELLFQSLKDAYGHFQLKKVAICHLEGKQAVSEGEVFASPFIIDSRYQNLLLPLIQSIMIGPDFQSYTYQEKREYFVNQIYPAYKVSLGIQESALPLFPEEGEQIPLDNTFVANRRVASIPTTSSEPRKPNSSFSLKKVYLLMGFLATLAAGAMVSSVSLHAELSKQQEQVNYLYQEWKDIQNLSDKEHQIDVFSRYFLPNYYSGKKENLSDFLSDGDAKYTVPKEGSLQSVILEKVTYDAKTKHYQLTYVLTIKAKEQLTSVRLEFEVKEQPSRKYGYVVTSEPKETPYLMKN |
1SJI Chain:A ((143-176)) | ------------------------------EDQIKLIGFFKSEESEYYKAFEEAAEHFQPYIKFFATFDKGVAKKLSLKMNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKIN------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5558 for 152 contacts (-36.6/contact) +
2D Compatibility (PS) -3503 + (NN) -424 + (LL) 11236
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -1599.0 ( -10.52 by residue)
QMean score : 0.611
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