Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDEKYGVPRDIYAKVKIIGLVIADIVFVGGSAVAALSIGTRIFPTNQWPQLVAFMILTPLMCLYLVLP-----TNGGKKNWHSMFLFFRRRRKRYISLNYQRRENR
2V26 Chain:A ((221-249))
------------------------------------------------------------VSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDN
General information:
TITO was launched using:
RESULT:
Template:
2V26.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1460 for 72 contacts (-20.3/contact) +
2D Compatibility (PS) -2444 + (NN) 312 + (LL) 4980
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -812.0 ( -11.28 by residue)
QMean score : -0.152
(partial model without unconserved sides chains):
PDB file :
Tito_2V26.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V26-query.scw
PDB file :
Tito_Scwrl_2V26.pdb
: