Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKTYRVKSDKDFQMIFSRGKNVANRKFVIYY---LEKEQKHFRVGISVSKKLGNAVVRNAIKRKIRHVLLSQKTALQDYD---FVVIA---RKGVEELNYQALEKNLIHVLKIAGLI
2OAU Chain:A ((27-105))
-------------------------------YAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQ-------TASVIAVLGAAGLA
General information:
TITO was launched using:
RESULT:
Template:
2OAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -376 for 349 contacts (-1.1/contact) +
2D Compatibility (PS) -7325 + (NN) -4864 + (LL) 3172
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -17493.0 ( -50.12 by residue)
QMean score : 0.196
(partial model without unconserved sides chains):
PDB file :
Tito_2OAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OAU-query.scw
PDB file :
Tito_Scwrl_2OAU.pdb
: